Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI8116BODZ
IGVFFI8116BODZ
released
validated
Json view
File Set
IGVFDS2004SFUP
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
3d5540b6e3b31eed3bfb2d54049c01b1
Content MD5sum
ae0a4cad4891d22800180d295b40c255
File Size
7.0 GB
Submitted File Name
igvf_010/nova2/igvf_010_B06_D_nova_N2_L003_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
H7YTNDSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
186978171
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9196BYCA
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8845HXAM
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3736JFOW
yaml
seqspec
seqspec of IGVFFI0823FXNB, IGVFFI8116BODZ
Ali Mortazavi, UCI
1.4 KB
validated