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INDEXED
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SequenceFile
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IGVFFI8111UVWA
IGVFFI8111UVWA
released
validated
Json view
File Set
IGVFDS6281FISI
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C37_day0_L3_R1
md5sum
81f15519cc80f826c147923ee1badcc6
Content MD5sum
7967d329300b1600d1fa0b404e963e5a
File Size
5.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C37D0-Pos1-C01_S25_L003_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.97
Read Count
76805238
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9498BCKY
InVitroSystem
fibroblast
fibroblast cell line, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA