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SequenceFile
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IGVFFI8096FFTI
IGVFFI8096FFTI
released
validated
Json view
File Set
IGVFDS2128TDSX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3917
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3917_R1
md5sum
3a5fe4363b1cd638e3c06c9b60f982dc
Content MD5sum
69dc39f5a377b54e4c6ed655a51f210c
File Size
396 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-763_L5_SS-PKR-170_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3917
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
7237342
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8353NHHV
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3136BVOB
yaml
seqspec
seqspec of IGVFFI8096FFTI, IGVFFI5894UASL, IGVFFI5643GEBW
Jason Buenrostro, Broad
1.3 KB
validated