IGVFFI8050THMN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9948CJNC(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G1_P052_L002_I1

md5sum

f71d322fac34a54aefd2f7a80be3fa77

Content MD5sum

0079efd8a080b76089167674c8eed332

File Size

200 MB

Submitted File Name

Multiome_RNA_RP001_G1_L001_P052_S1_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

28981241

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7927MDCD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples