IGVFFI8031UVLO

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1225ARBV(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 2

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G5_P056_L003_I1

md5sum

3db0ea9bb50480338de7f7e2d5b12f6f

Content MD5sum

13a8d37ee361d8d8525a42cd2d735229

File Size

479 MB

Submitted File Name

Multiome_RNA_RP005_G5_L005_P056_S17_L003_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

225LGWLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

83188725

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1655YUWG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples