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SequenceFile
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IGVFFI8006DCMK
IGVFFI8006DCMK
released
validated
Json view
File Set
IGVFDS5473KODL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8761
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8761_R1
md5sum
d874a416983d644f7244f3c09b162196
Content MD5sum
b595837b5a864e39829ca56e92ce8a2c
File Size
1.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2303_L4_SS-PKR-180_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8761
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
38471479
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7279BVJC
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6292JQYX
yaml
seqspec
seqspec of IGVFFI8006DCMK, IGVFFI7845AXQV, IGVFFI0324KMSP
Jason Buenrostro, Broad
1.3 KB
validated