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INDEXED
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SequenceFile
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IGVFFI7969ZWKM
IGVFFI7969ZWKM
released
validated
Json view
File Set
IGVFDS9624INNM
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_101_rna_r2
md5sum
ac256eb6f6a4115ec338c88e8874ef25
Content MD5sum
fe6eac9b35a61df63726c99fa7f40f15
File Size
26 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230622_IGVF_Bridge_McGinnis/GEX/RNA_101_S1_L004_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
HW2WLDSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
533167740
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2776DDRF
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male, 10 weeks) left cerebral cortex tissue
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7597MNBE
yaml
seqspec
seqspec of IGVFFI7969ZWKM, IGVFFI6962GHCW, IGVFFI2437QQSO, IGVFFI1831EEUZ
Ansuman Satpathy, Stanford
1.4 KB
validated