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INDEXED
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SequenceFile
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IGVFFI7958FSMZ
IGVFFI7958FSMZ
released
validated
Json view
File Set
IGVFDS0373FQFP
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P007-R2
md5sum
1963ca70f16d05c5a672ce68bde19b31
Content MD5sum
4fa2a148d1f0f8608a7bb242926fad30
File Size
7.7 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool7.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKFM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
49332008
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5386DLRD
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.0 GB
validated
IGVFFI7236IYAN
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
7.3 GB
validated