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INDEXED
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SequenceFile
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IGVFFI7946JZHZ
IGVFFI7946JZHZ
released
validated
Json view
File Set
IGVFDS3212RENM
(single-cell ATAC-seq (SHARE-seq))
Summary
I1 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS16-prim-9K-2-ATAC.barcode.fastq.gz
md5sum
702039b499f8103d01d7af26b59b942b
Content MD5sum
779a3573fb18b0a1786fb8252644d822
File Size
1.5 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/DSS16-prim-9K-2-ATAC.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
89522520
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7017UXAA
PrimaryCell
colon
Mus musculus C57BL/6J colon cell
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2836UUTC
yaml
seqspec
seqspec of IGVFFI5303RQBI, IGVFFI0162FERT, IGVFFI7946JZHZ
Jason Buenrostro, Broad
1.2 KB
validated