IGVFFI7928LBZM

released
validated
File Set
IGVFDS2598INQR(CRISPR HiCAR integrating a guide (sgRNA) library targeting accessible genome regions in a genomic locus)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-crispra-region3-1umET1-ipsc-cm-targeted-hicar-rep1-R2
md5sum
1adfa9541d4c4541cb92c706b574c698
Content MD5sum
1879480a3397d6a9872eeb5cb8c9ef9c
File Size
1.1 GB
Submitted File Name
/hpc/group/gersbachlab/tda17/IGVF_data_files/HiCAR/fastq/crispra_human/crispra_hicar_human_fastq/H_vp64_r2_TA448_1_1uMET1_ds.e858c0c6acc64a2ab755c9f2b042627c/H_vp64_r2_TA448_1_1uMET1_S8_L001_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
4
Sequencing Kit
NextSeq 1000/2000 P2 Reagent Kit
Illumina Read Type
R2
Average Read Length
100
Read Count
19886065

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 42 days, male, Homo sapiens treated with 1 μM Endothelin-1 for 3 days, transfected with a guide library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
mcool
contact matrix
genomic position by genomic position in contact matrix
Charles Gersbach, Duke
38 MB
validated

Attribution