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INDEXED
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SequenceFile
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IGVFFI7904KSEE
IGVFFI7904KSEE
released
validated
Json view
File Set
IGVFDS5266ONOB
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2363
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2363_R2
buenrostro-bernstein:SS-LS_2363_R2
md5sum
9b8a544828c13317e1231881ee3634f3
Content MD5sum
19c608511e1a7f44d586089ae32d4ef4
File Size
798 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-31_L2_SS-PKR-3_SS-V2-PLATE2-1st-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2363
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
17455388
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3750ZIQU
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (49 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad