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INDEXED
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SequenceFile
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IGVFFI7887KVTU
IGVFFI7887KVTU
released
validated
Json view
File Set
IGVFDS6623PZMD
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8314
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8314_R2
md5sum
006fdae99bc406e4b1fd5eaea4e8584b
Content MD5sum
85b24c0a49c7c5edbb1572114ce500d6
File Size
4.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2160_L1_SS-PKR-574_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8314
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
73049669
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7444XSMN
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3324IZAH
yaml
seqspec
seqspec of IGVFFI9015IWKL, IGVFFI7887KVTU
Jason Buenrostro, Broad
1.3 KB
validated