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INDEXED
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SequenceFile
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IGVFFI7885SQWQ
IGVFFI7885SQWQ
released
validated
Json view
File Set
IGVFDS3304YLTM
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C37_day3_L1_R1
md5sum
ac111cd049618832f1af440885695f47
Content MD5sum
e491f4f683ed89401b6d6ac49d1b8fc7
File Size
6.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C37D3-Pos1-C07_S31_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
149.17
Read Count
88928674
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2615PEIB
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA