{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI7875UNHZ/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI7875UNHZ",
"aliases": [
"jay-shendure:scATAC_mEBs_rep1_day21_10XlaneB_I2"
],
"audit": {},
"award": {
"@id": "/awards/HG011966/",
"component": "functional characterization"
},
"content_md5sum": "ceebf0432ce70105264c455e36b6072f",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2024-05-09T16:52:16.202136+00:00",
"file_format": "fastq",
"file_set": "/measurement-sets/IGVFDS6675BDQA/",
"file_size": 1827545081,
"flowcell_id": "H3JK7BGXG",
"gene_list_for": [],
"href": "/sequence-files/IGVFFI7875UNHZ/@@download/IGVFFI7875UNHZ.fastq.gz",
"illumina_read_type": "I2",
"input_file_for": [
"/signal-files/IGVFFI9468KRLQ/",
"/signal-files/IGVFFI4530JOCA/",
"/signal-files/IGVFFI4106YTGZ/",
"/signal-files/IGVFFI6250RJNE/",
"/signal-files/IGVFFI4871DVXE/",
"/signal-files/IGVFFI8400FXRX/",
"/signal-files/IGVFFI9916JAHE/"
],
"integrated_in": [],
"lab": {
"@id": "/labs/jay-shendure/",
"title": "Jay Shendure, UW"
},
"lane": 1,
"loci_list_for": [],
"maximum_read_length": 16,
"md5sum": "664cce1ddcc0aa6234cc738e2619285e",
"mean_read_length": 16,
"minimum_read_length": 16,
"read_count": 105803579,
"release_timestamp": "2024-07-09T20:16:42.382551+00:00",
"s3_uri": "s3://igvf-files/2024/05/09/343c8a9d-f4de-45d4-b0a5-3adcd308e3d6/IGVFFI7875UNHZ.fastq.gz",
"schema_version": "14",
"seqspecs": [
"/configuration-files/IGVFFI0221JPNZ/"
],
"sequencing_kit": "NextSeq 500/550 High-Output v2.5 Kit",
"sequencing_platform": "/platform-terms/EFO_0009173/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/73f58e9f-8f5d-4fee-a7cd-dd63c0167e4b/",
"title": "Beth Martin"
},
"submitted_file_name": "/net/shendure/vol8/projects/JBL/GEO_scATAC_EB_correction_nobackup/scATAC_mEBs/scATAC_mEBs_d21_crispri_rep1_lane_b_I2_001.fastq.gz",
"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "343c8a9d-f4de-45d4-b0a5-3adcd308e3d6"
}