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INDEXED
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SequenceFile
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IGVFFI7860PJIJ
IGVFFI7860PJIJ
released
validated
Json view
File Set
IGVFDS2063ABVV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8791
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8791_R1
md5sum
3ab0d76f8356d1c471a5d71b61361786
Content MD5sum
e02a1e28eabf4dbc1e062a841c0a29dc
File Size
894 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2333_L4_SS-PKR-199_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8791
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
19949258
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3378QHHI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8348YUPG
yaml
seqspec
seqspec of IGVFFI7860PJIJ, IGVFFI5665JKUE, IGVFFI2116HFGS
Jason Buenrostro, Broad
1.3 KB
validated