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IGVFFI7813PJJE

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS2753IVGH(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X038_G4_P039_L003_R3
md5sum
fd4fde23ee9de8da2b18b1e7ab5ec32b
Content MD5sum
3e568c403a25737accdf58b379578b90
File Size
6.9 GB
Submitted File Name
Multiome_ATAC_X038_G4_L004_P039_S18_L003_R3_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5VM5DSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
49
Read Count
219145383

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF