IGVFFI7804FCVZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0198YHSP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X012_G4_P010_L002_I1

md5sum

d8c2d8369286d19c30d9dbb4dce9a121

Content MD5sum

0321beb78ae5e7f5ad11b68a494ec2ce

File Size

2.2 GB

Submitted File Name

Multiome_RNA_X012_G4_L004_P010_S14_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

326052919

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9021MNYU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue; Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples