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IGVFFI7772UEUD

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8419ZMNL(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:donor1_Bcell_multiome_GEX_NGS_Day5_6_L003_R2_corrected
md5sum
28fd8a84f571ff6aaa489971c422c575
Content MD5sum
fad6f35ce4a1887dbf45619b95930ecb
File Size
2.7 GB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/fastqs/scRNA/NP002_03_120222_Singh_Multiome_GEX_LAF4451A13_S18_L003_R2_001.fastq.gz
Checkfiles Version
v19
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
59357703

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 6 days

Files Derived From This File

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.8 GB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
447 MB
validated