IGVFFI7758PHSI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3133JMDG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X007_G4_P006_L002_R2

md5sum

61cb54b66f3a3503fc814bee5cc19827

Content MD5sum

6c663b01fdce0f2ff36637a70f63666a

File Size

16 GB

Submitted File Name

Multiome_RNA_X007_G4_L004_P006_S14_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5THNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

100

Read Count

303416313

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8548OQWB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 81 years) putamen tissue; Homo sapiens (male, 90 or above years) cerebellar cortex tissue; ... and 10 more samples