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INDEXED
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SequenceFile
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IGVFFI7735CDGU
IGVFFI7735CDGU
released
validated
Json view
File Set
IGVFDS7938OXSK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5381
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5381_R1
md5sum
6ebc758d6a27974f1f414cd9a5d01481
Content MD5sum
e39435a054c49bbfcdeefdbffed7196c
File Size
4.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1590_L5_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5381
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
88119512
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2897TNFT
yaml
seqspec
seqspec of IGVFFI7735CDGU, IGVFFI3521DARM
Jason Buenrostro, Broad
1.3 KB
validated