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INDEXED
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SequenceFile
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IGVFFI7719EOHS
IGVFFI7719EOHS
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6323NFTV
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 200
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX14-SC4_snATAC_S3_R1
md5sum
5a3569043821476cfb297d3dd68e5c87
Content MD5sum
1ef87916d7fdd21857ff45893ff1639a
File Size
7.6 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX14-SC4/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX14-SC4-ATAC_S3_L004_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
200
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
249856119
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9745CPOX
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 52.0 years) peripheral blood mononuclear cell; ... and 18 more samples