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IGVFFI7710NGVV

released
validated
File Set
IGVFDS6493BIXB(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2324
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2324_R1
buenrostro-bernstein:SS-LS_2324_R1
md5sum
64d366c5f7baf73b80482e7b83b89d1d
Content MD5sum
b44ce2e64744f1d0bc6f3ced6d256bfa
File Size
577 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-88_L1_SS-PKR-8_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2324
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
29677813

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 8), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad