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INDEXED
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SequenceFile
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IGVFFI7687PLDC
IGVFFI7687PLDC
released
validated
Json view
File Set
IGVFDS9664AFSO
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 960
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_960_R1
md5sum
5c0ba303f229f709fd7b817604cee519
Content MD5sum
0b9a76b9103c75494b30fc4d2e279eba
File Size
548 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-973_L1_SS-PKR-205_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
960
Flowcell ID
22773CLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9376801
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7296NMXX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5507KJXF
yaml
seqspec
seqspec of IGVFFI7687PLDC, IGVFFI1292GOXJ, IGVFFI2373YGYG
Jason Buenrostro, Broad
1.3 KB
validated