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INDEXED
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SequenceFile
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IGVFFI7680RHQJ
IGVFFI7680RHQJ
released
validated
Json view
File Set
IGVFDS4445ONRZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4324
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4324_R1
md5sum
dc2b3b81c6366a2b08fc4ec5ed5a9106
Content MD5sum
5a23bba41c0c89ef4c73a4b3e27de33d
File Size
1.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-561_L1_SS-PKR-208_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4324
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
24111095
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8598BUOK
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 208)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7856FWSI
yaml
seqspec
seqspec of IGVFFI7680RHQJ, IGVFFI5850YYGN, IGVFFI6039OVYP
Jason Buenrostro, Broad
1.3 KB
validated