IGVFFI7670JIOY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1853NUVR(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X012_G3_P010_L002_I1

md5sum

4ef6887c25878ae2fa4c27e414a60854

Content MD5sum

6c518d339378585401fc4ef180f45aa7

File Size

1.3 GB

Submitted File Name

Multiome_RNA_X012_G3_L003_P010_S13_L002_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

172408601

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4418HKGN

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue; Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples