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IGVFFI7625UHVM

released
validated
File Set
IGVFDS2015MZJB(quantification DNA barcode sequencing for lentiMPRA integrating a reporter library targeting candidate cis-regulatory elements genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
5c28ba24c8d44f4f792d8a0f5d0adbd6
Content MD5sum
413c80688b476337f01e6355fe13541c
File Size
936 MB
Submitted File Name
"/data/cephfs-2/unmirrored/groups/ag-kircher/IGVF_data_submssion_TM/proximalPromotor/run1/dna-3_S3_R1_001.fastq.gz"
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
seqrun1
Attribution
Nadav Ahituv, UCSF

Sequencing Details

Sequencing Platform
Illumina NextSeq 500
Sequencing Run
1
Sequencing Kit
NextSeq 500 High Output v2 Kit
Illumina Read Type
R1
Average Read Length
15
Read Count
49553618

Files Derived From This File

3 items
tsv
reporter experiment barcode
GRCh38 reporter experiment barcode
Nadav Ahituv, UCSF
246 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
20 MB
validated
tsv
reporter experiment
GRCh38 reporter experiment
Nadav Ahituv, UCSF
19 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7625UHVM, IGVFFI9636CVWT, IGVFFI6150BVVR, IGVFFI5706ISAV, IGVFFI6548NEJG, IGVFFI5093RTXQ, IGVFFI7696HGKL, IGVFFI0880DPOQ, IGVFFI2983CGMA
Nadav Ahituv, UCSF
1.6 KB
validation exempted