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SequenceFile
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IGVFFI7576AFLE
IGVFFI7576AFLE
released
validated
Json view
File Set
IGVFDS6474NPQL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4351
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4351_R1
md5sum
542f0056740dd3f40973c01c318d1a81
Content MD5sum
eff7c87634e427fe7b59a657e9568851
File Size
4.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-536_L1_SS-PKR-172_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4351
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
65734691
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6704LCJI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI6522OUGB
yaml
seqspec
seqspec of IGVFFI7576AFLE, IGVFFI0317LCLX, IGVFFI8602TGXK
Jason Buenrostro, Broad
1.3 KB
validated