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INDEXED
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SequenceFile
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IGVFFI7572OMVL
IGVFFI7572OMVL
released
validated
Json view
File Set
IGVFDS3635URQY
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4283
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4283_R1
md5sum
bb30699151d299c22623e298608c3ad7
Content MD5sum
8df3bbe7b3d29379b8d557596c89da4a
File Size
8.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-514_L4_SS-PKR-177_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4283
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
133852955
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8039CDHD
yaml
seqspec
seqspec of IGVFFI7572OMVL, IGVFFI0117OIAN, IGVFFI9539YYKV
Jason Buenrostro, Broad
1.4 KB
validated