IGVFFI7572FUJA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7496XKTN(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X038_G6_P040_L004_R2

md5sum

8ed2e3055252d4ed1654ae0385c91879

Content MD5sum

2c9899f9f24ae6a97eb9c0c9f9ffdbc1

File Size

11 GB

Submitted File Name

Multiome_RNA_X038_G6_L006_P040_S20_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VM5DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

230774852

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9167BOAS

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples