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IGVFFI7538HUYL

released
validated
File Set
IGVFDS7709QUBW(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 265
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2119_R2
bradley-bernstein:SS-LS_265_R2
buenrostro-bernstein:SS-LS_2119_R2
buenrostro-bernstein:SS-LS_265_R2
md5sum
a770b539a574730b36c7ecdc04ad8d90
Content MD5sum
5cf9c780726455a9b7b7d62525750750
File Size
623 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-201_L2_SS-PKR-131_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
265
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
13056458

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 131)

Files Derived From This File

2 items
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.2 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
924 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9409TJIS, IGVFFI7538HUYL
Jason Buenrostro, Broad
1.2 KB
validated