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IGVFFI7516RQYI

released
validated
File Set
IGVFDS6361NSJR(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 62
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1982_R2
bradley-bernstein:SS-LS_62_R2
buenrostro-bernstein:SS-LS_1982_R2
buenrostro-bernstein:SS-LS_62_R2
md5sum
53ba18e63d33d6e19dc5c3691bbe9ade
Content MD5sum
cf0969c83bc714e3b5e64ebce859defc
File Size
800 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-135_L1_SS-PKR-130_SS-V1-RIGHT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
62
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
17164356

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 130)

Files Derived From This File

2 items
tar
comprehensive gene count matrix
unfiltered cell by gene in comprehensive gene count matrix
Jason Buenrostro, Broad
2.6 GB
validated
h5ad
sparse gene count matrix
unfiltered cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
467 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9424HRUH, IGVFFI7516RQYI
Jason Buenrostro, Broad
1.2 KB
validated