Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI7516OLFV
IGVFFI7516OLFV
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7129ASVR
(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 344
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX21-SC4_snRNA_S0_I2
md5sum
3cc57b20c0d3894f20945f115ca9362f
Content MD5sum
c4795750dd31486e14aec46fbdb29aea
File Size
2.1 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX21-SC4/AH7V7HDSX/XHLT1-POOL-XX21-SC4-GEX_S4_L001_I2_001.fastq.gz
Checkfiles Version
v20
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
344
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
288683128
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9160FXRO
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples