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IGVFFI7512KRYI

released
validated
File Set
IGVFDS9364TNAM(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS05-prim3-ATAC.R2.fastq.gz
md5sum
e287954412e5c723b14a26a5f632f22f
Content MD5sum
3079f2f276fc3b2399a14f1ea1d8b0ba
File Size
3.5 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS05-prim3-ATAC.R2.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS05-prim-12k-2,DSS05-prim-12k-3_P1.61,DSS05-prim-12k-4_P1.05

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
49.43
Read Count
100518150

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1625RYZQ, IGVFFI7512KRYI, IGVFFI0602TOGB
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad