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IGVFFI7512KRYI

released
validated
File Set
IGVFDS9364TNAM(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS05-prim3-ATAC.R2.fastq.gz
md5sum
e287954412e5c723b14a26a5f632f22f
Content MD5sum
3079f2f276fc3b2399a14f1ea1d8b0ba
File Size
3.5 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS05-prim3-ATAC.R2.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS05-prim-12k-2,DSS05-prim-12k-3_P1.61,DSS05-prim-12k-4_P1.05
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
49.43
Read Count
100518150

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1625RYZQ, IGVFFI7512KRYI, IGVFFI0602TOGB
Jason Buenrostro, Broad
1.2 KB
validated