IGVFFI7485JXZQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3499IMSW(cell hashing barcode sequencing for CRISPR interference Perturb-seq integrating a guide (sgRNA) library targeting accessible genome regions in many genomic loci)

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

gary-hon:LW263C_1_R2

md5sum

7a1916f7eb85bac482c4bab209d51bb6

Content MD5sum

ef71ebba45bef0cd4f048890892f1c2b

File Size

836 MB

Submitted File Name

/project/GCRB/Hon_lab/shared/data/sequencing_data/2023/2023-07-07-McDermott-NextSeq.10X.run1.sgRNA_HTO/2023-07-07/outs/fastq_path/AACV7CFM5/LW263C_S11_L001_R2_001.fastq.gz

Checkfiles Version

Legacy version of checkfiles

Sequencing Details

Sequencing Platform

Illumina NextSeq 2000

Sequencing Run

Flowcell ID

AACV7CFM5

Lane

Illumina Read Type

Average Read Length

Read Count

16687831

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM0333RWYR

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 12 days (cellular sub pool: subpool_LW263), male, Homo sapiens modified with CRISPRi Sp-dCas9, transduced (lentivirus) with a guide library