IGVFFI7481IACD

released
validated
File Set
IGVFDS0282GEHF(gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:auxiliary_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S1_I1
md5sum
c3f1de751ca3b2867793a59386c4ddf7
Content MD5sum
3ee070922345339c6977ebf183fbebed
File Size
55 MB
Submitted File Name
/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L361_S2_L001_I1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Lane
1
Illumina Read Type
I1
Average Read Length
8
Read Count
6610407

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1488GZKB, IGVFFI7481IACD, IGVFFI5080FNQC
Jesse Engreitz, Stanford
1.2 KB
validated

Attribution