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IGVFFI7480JBSY

released
validated
File Set
IGVFDS6426PXJS(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp6_atac_10x1_NGS2_r1
md5sum
2dff4977d382908eb7b037c5274b3762
Content MD5sum
c13b5b23d107fe89ce9a60875ed002f0
File Size
12 GB
Submitted File Name
/oak/stanford/projects/igvf/Projects/230522_IGVF6_McGinnis/ATAC/FASTQ/ATAC_1_S5_L006_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223JH2LT3
Lane
6
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
51
Read Count
385303481

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 18 days; Homo sapiens (male) H1-hESC differentiated cell specimen induced to islet of Langerhans for 7 days; ... and 6 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
8.1 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0087JKGS, IGVFFI5980EQAR, IGVFFI7480JBSY, IGVFFI3605KCDU
Ansuman Satpathy, Stanford
1.4 KB
validated