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INDEXED
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SequenceFile
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IGVFFI7475DJYV
IGVFFI7475DJYV
released
validated
Json view
File Set
IGVFDS1324EVBY
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 4295
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4295_R1
md5sum
fca9d7a217547598e89b8edd18273097
Content MD5sum
11d1becf987948baefd5f342187a596c
File Size
3.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-515_L4_SS-PKR-177_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4295
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
53554251
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4166RBAA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4360YFMA
yaml
seqspec
seqspec of IGVFFI7475DJYV, IGVFFI2861ZGRK, IGVFFI1813KTZO
Jason Buenrostro, Broad
1.4 KB
validated