IGVFFI7463MHHP

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2651QSZQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X027_G5_P028_L004_R2

md5sum

b1f579da7d7658403b1ea2dea197bdb1

Content MD5sum

b795dee32af49420bf926ad5623c8070

File Size

9.1 GB

Submitted File Name

Multiome_RNA_X027_G5_L005_P028_S14_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

182698197

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8693AIJI

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 71 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples