IGVFFI7440JFKZ

released

validated

File Set

IGVFDS2532AVSC(gRNA sequencing for scCRISPR activation screen integrating a guide (sgRNA) library targeting TF binding sites, candidate cis-regulatory elements in many genomic loci)

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jay-shendure:CRISPRa_singlecell_iPSCneuron_VPH_sequence_CS1_10Xlane3_seqlane2_I1

md5sum

275cb715ea947715991ade2a58f8227a

Content MD5sum

1d49526b885e1790b198d9d6114b86a6

File Size

290 MB

Submitted File Name

/net/shendure/vol10/www/content/members/CRISPRa_QTL_website/public/data/neuron_data/sequencing_data/cellranger_mkfastq_output/outs/fastq_path/AAAMCTVHV/CS1_3/CS1_3_S7_L002_I1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NextSeq 2000

Sequencing Run

Flowcell ID

AAAMCTVHV

Lane

Sequencing Kit

NextSeq 1000/2000 P3 Reagent Kit

Illumina Read Type

Average Read Length

Read Count

50114302

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM8317ZTFV

InVitroSystem

GM25256 (WTC-11)

GM25256 (WTC-11) differentiated cell specimen induced to neuron for 19 days (cellular sub pool: 10Xlane3), male, Homo sapiens modified with CRISPRa Sp-dCas9-VPH, transfected with a guide library