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INDEXED
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SequenceFile
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IGVFFI7428JVFJ
IGVFFI7428JVFJ
released
validated
Json view
File Set
IGVFDS5576TGNS
(ATAC-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-atac-chir4um-ipsc-cm-rep1-R2
md5sum
32bf1b5aa2ca320e9d1a288878836b82
Content MD5sum
d2be07117ff4e0ee22e67c4c7e243e02
File Size
2.4 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6/data/atac_seq/processed_raw_reads/Anglen_7276_210923B6/CHRIR4uM_1.R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Charles Gersbach, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
51
Read Count
77899336
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6698FQIG
InVitroSystem
GM25256 (WTC-11)
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days treated with 4 μM GSK3 inhibition for 7 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1534IVYM
bam
alignments
GRCh38 filtered alignments
Charles Gersbach, Duke
3.3 GB
validated