IGVFFI7422TYFU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5607SKBT(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X031_G3_P032_L004_R2

md5sum

a8c3cd95419c86f22ae1d994a2ed5c65

Content MD5sum

362c8ef11345aaaff5b9b93a19b32add

File Size

15 GB

Submitted File Name

Multiome_RNA_X031_G3_L003_P032_S45_L004_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV7VHDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

101

Read Count

262652853

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8532DSVV

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 80 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples