IGVFFI7412CHXG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9074SVYE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G8_P072_L008_I2

md5sum

ffa9fce0cd2e8831c29edec922ccddfe

Content MD5sum

7c1dd78d16e6e2118d9f4809fdf0fadc

File Size

1.2 GB

Submitted File Name

Multiome_RNA_X053_G8_L008_P072_S72_L008_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

148999926

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8322GNNB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples