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SequenceFile
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IGVFFI7401MLRR
IGVFFI7401MLRR
released
validated
Json view
File Set
IGVFDS9540QIQR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8652
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8652_R1
md5sum
69dd4476be64bb971c1570b984f6a5f8
Content MD5sum
67eea7e9072d032cbfae585b9a9ce6a0
File Size
15 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2290_L3_SS-PKR-178_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8652
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
315673
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5888ULVX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2248KTHE
yaml
seqspec
seqspec of IGVFFI7401MLRR, IGVFFI8640LVJF, IGVFFI0468MTUT
Jason Buenrostro, Broad
1.3 KB
validated