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IGVFFI7385RIWV

released
validated
File Set
IGVFDS8700PWZJ(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 252
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2056_R2
bradley-bernstein:SS-LS_252_R2
buenrostro-bernstein:SS-LS_2056_R2
buenrostro-bernstein:SS-LS_252_R2
md5sum
9e33c9a32e566408798f6077df75e51d
Content MD5sum
0f3e19402c2efcefd67b8a84b184c183
File Size
2.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-185_L1_SS-PKR-132_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
252
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
38880027

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7270DMRN, IGVFFI7385RIWV
Jason Buenrostro, Broad
1.2 KB
validated