IGVFFI7324OVYD

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5273QVEC(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G7_P052_L002_R1

md5sum

85acec2ddec16c8ec95fac821acb6f1c

Content MD5sum

3a34c45fc4f5822f9dca2e2966d87a31

File Size

1.5 GB

Submitted File Name

Multiome_RNA_RP002_G7_L007_P052_S15_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

78141312

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2339RJIS

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples