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INDEXED
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SequenceFile
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IGVFFI7321RNIN
IGVFFI7321RNIN
released
validated
Json view
File Set
IGVFDS8657TVHG
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 8
File Format
fastq
Content Type
reads
md5sum
1ae91772cfe1df522c83bf623c9674d2
Content MD5sum
f346690a5b0fdcbfe81858a294dd6ef1
File Size
5.9 GB
Submitted File Name
igvf_010/nova2/igvf_010_B03_D_nova_N2_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
8
Flowcell ID
H7YTNDSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
156362315
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4857GMKY
MultiplexedSample
gastrocnemius
,
kidney
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus WSB/EiJ (male, 69 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1537EMUG
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0044RXON
yaml
seqspec
seqspec of IGVFFI6472GWFQ, IGVFFI7321RNIN
Ali Mortazavi, UCI
1.4 KB
validated