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INDEXED
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SequenceFile
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IGVFFI7274KASH
IGVFFI7274KASH
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3345CLWD
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X050_G2_P066_L007_R2
md5sum
1291e2e0b41f50bc7d2ec71aa2a81644
Content MD5sum
b02e31631e4b7aa2009a74debc28600c
File Size
2.3 GB
Submitted File Name
Multiome_RNA_X050_G2_L002_P066_S32_L007_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
2257GYLT3
Lane
7
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
56326781
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM8296KGSW
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 8 more samples