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IGVFFI7270DMRN

released
validated
File Set
IGVFDS8700PWZJ(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 252
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2056_R1
bradley-bernstein:SS-LS_252_R1
buenrostro-bernstein:SS-LS_2056_R1
buenrostro-bernstein:SS-LS_252_R1
md5sum
d20622c9546f8e063fd4343a64dc75d1
Content MD5sum
45e9b0d62c2708c2b5a8513b4ea3234c
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-185_L1_SS-PKR-132_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
252
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
38880027

Samples

1 item
Accession
Type
Sample Terms
Summary
Tissue
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)

Files Derived From This File

2 items
bam
alignments
GRCm39 unfiltered alignments
Jason Buenrostro, Broad
6.1 GB
validated
bed
fragments
GRCm39 unfiltered fragments
Jason Buenrostro, Broad
845 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI7270DMRN, IGVFFI7385RIWV
Jason Buenrostro, Broad
1.2 KB
validated