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INDEXED
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SequenceFile
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IGVFFI7270DMRN
IGVFFI7270DMRN
released
validated
Json view
File Set
IGVFDS8700PWZJ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 252
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2056_R1
bradley-bernstein:SS-LS_252_R1
buenrostro-bernstein:SS-LS_2056_R1
buenrostro-bernstein:SS-LS_252_R1
md5sum
d20622c9546f8e063fd4343a64dc75d1
Content MD5sum
45e9b0d62c2708c2b5a8513b4ea3234c
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-185_L1_SS-PKR-132_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
252
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
38880027
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8883WYCA
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0846TMYA
yaml
seqspec
seqspec of IGVFFI7270DMRN, IGVFFI7385RIWV
Jason Buenrostro, Broad
1.2 KB
validated