IGVFFI7267CIMW

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7114WEPZ(CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSite-IndividualVariantExp-AGGT_CAAC-THP1-BioRep1-FFrep1-FACS_Input-PCRrep2_I1
md5sum
0f29d7f8c96d5d68cb2b8f2cfd84f4ac
Content MD5sum
baf153b83f2f3b93858e37be9eb09015
File Size
13 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_C11-Amp_PPIF_5splicesite-BioRep1-FFrep1-BinAll-PCRrep2_S983_I1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Illumina Read Type
I1
Index
CTAACTCG:AGGTGCGT
Average Read Length
8
Read Count
1680864

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution