Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI7246OMMR
IGVFFI7246OMMR
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS6431QGJL
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 431
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX4-SC3_snRNA_S2_R2
md5sum
29fca69e727f1caa5a60974c2b63e34a
Content MD5sum
1f94cf96f1d34e745dc1d277cdb60ab0
File Size
7.2 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX4-SC3/BHM2VLDSX2/XHLT1-POOL-XX4-SC3-GEX_S15_L001_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
431
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
141101881
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9062JXMC
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples